STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49006.1Aldehyde Dehydrogenase. (507 aa)    
Predicted Functional Partners:
AEI49202.1
Aldehyde Dehydrogenase.
  
  
 
0.919
AEI49076.1
acetate/CoA ligase.
  
 0.911
AEI49005.1
Protein of unknown function DUF779.
 
    0.909
AEI51296.1
Lactate 2-monooxygenase.
   
 
 0.906
AEI46519.1
Methionyl-tRNA formyltransferase.
 
    
 0.900
AEI49008.1
Transcriptional regulator, AraC family.
 
     0.678
AEI48352.1
Proline dehydrogenase.
 
 
 0.664
AEI49007.1
Hypothetical protein.
       0.598
AEI48170.1
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.
  
 0.568
AEI51807.1
3-hydroxybutyryl-CoA epimerase.
  
 0.568
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.