STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI49024.1Glucose/galactose transporter. (414 aa)    
Predicted Functional Partners:
AEI49023.1
Protein of unknown function DUF718.
 
  
 0.883
AEI49022.1
3-oxoacyl-(acyl-carrier-protein) reductase.
  
    0.789
AEI49021.1
Mandelate racemase/muconate lactonizing protein.
       0.746
AEI49025.1
Glycoside hydrolase family 29 (alpha-L-fucosidase).
       0.732
AEI49026.1
Hypothetical protein.
       0.699
AEI49027.1
Hypothetical protein.
       0.699
AEI49020.1
Alpha-L-fucosidase.
       0.637
AEI49019.1
N-acetylgalactosamine-6-sulfatase.
       0.505
AEI50211.1
Protein of unknown function DUF718.
 
  
 0.484
AEI49018.1
Alpha-L-fucosidase.
       0.463
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.