STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI49042.1Fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (783 aa)    
Predicted Functional Partners:
AEI51043.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
 0.983
AEI49040.1
SSS sodium solute transporter superfamily.
 
    0.851
AEI49041.1
Beta-glucuronidase.
 
   
 0.783
AEI51223.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
  
  
 0.783
AEI49388.1
2-oxoglutarate dehydrogenase, E1 subunit.
  
 
 0.781
AEI51801.1
NADH-quinone oxidoreductase, F subunit.
  
 
 0.780
AEI47824.1
Glycine dehydrogenase (decarboxylating).
  
  
 0.778
AEI50492.1
Succinyl-CoA ligase (ADP-forming) subunit beta.
  
 
 0.771
AEI48946.1
FAD dependent oxidoreductase.
  
 
 0.770
AEI49876.1
succinyl-CoA synthetase, alpha subunit.
  
 
 0.769
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.