STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49047.1Glutamate 5-kinase. (343 aa)    
Predicted Functional Partners:
AEI47350.1
Gamma-glutamyl phosphate reductase.
 
 0.999
AEI47102.1
Ornithine aminotransferase.
   
 0.925
AEI47905.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
     
 0.904
AEI47359.1
Pyrroline-5-carboxylate reductase.
 
 0.894
AEI49571.1
glycyl-tRNA synthetase.
 
 
    0.577
AEI46858.1
Aspartate kinase.
  
  
 0.568
AEI48513.1
GTP cyclohydrolase-2.
     
 0.529
AEI47917.1
Glycine hydroxymethyltransferase.
  
 0.517
AEI51099.1
Ribose-phosphate pyrophosphokinase.
    
 0.513
AEI46599.1
ATP synthase subunit delta.
    
 0.496
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.