STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49059.1Xenobiotic-transporting ATPase. (589 aa)    
Predicted Functional Partners:
AEI47012.1
Hypothetical protein.
  
     0.600
AEI47011.1
Phosphoesterase PA-phosphatase related protein.
  
   
 0.575
AEI51251.1
Hypothetical protein.
  
     0.571
AEI50828.1
SMC domain protein.
  
     0.569
AEI46526.1
Hypothetical protein.
  
 
  0.568
AEI48985.1
Hypothetical protein.
  
     0.538
AEI46621.1
Alanine racemase domain protein.
  
     0.529
AEI50033.1
Hypothetical protein.
  
     0.512
AEI50711.1
Tetratricopeptide TPR_1 repeat-containing protein.
  
 
  0.508
AEI49561.1
Hypothetical protein.
  
    0.502
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.