STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49144.1Glycerophosphoryl diester phosphodiesterase. (572 aa)    
Predicted Functional Partners:
AEI49142.1
Glycerophosphoryl diester phosphodiesterase.
 
 
 
0.954
AEI47056.1
Glycerophosphoryl diester phosphodiesterase.
 
 
  0.949
AEI51438.1
Glycerophosphoryl diester phosphodiesterase.
 
 
 
0.922
AEI49143.1
Hypothetical protein.
       0.648
AEI50099.1
Glycerol kinase.
 
  
 0.640
AEI49145.1
Metallophosphoesterase.
 
   
 0.635
AEI47099.1
Gluconokinase.
 
   
 0.486
AEI48946.1
FAD dependent oxidoreductase.
  
 
 0.447
AEI50814.1
Gluconokinase.
 
   
 0.444
AEI49146.1
DEAD/DEAH box helicase domain protein.
   
 
 0.438
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.