STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49153.1Hypothetical protein. (365 aa)    
Predicted Functional Partners:
AEI47381.1
ADP-heptose:LPS heptosyltransferase-like protein.
  
     0.746
AEI48744.1
Hypothetical protein.
  
     0.728
AEI51934.1
Hypothetical protein.
 
     0.727
AEI50627.1
Hypothetical protein.
  
     0.722
AEI47539.1
Hypothetical protein.
  
     0.712
AEI46895.1
Response regulator receiver and SARP domain protein.
  
     0.708
AEI48662.1
Hypothetical protein.
  
     0.703
AEI47540.1
TonB-dependent receptor plug.
  
     0.683
AEI46950.1
Hypothetical protein.
  
     0.681
AEI47964.1
Hypothetical protein.
  
     0.666
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.