STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49160.1Peroxiredoxin, Ohr subfamily. (138 aa)    
Predicted Functional Partners:
AEI49159.1
NADPH:quinone reductase.
  
  
 0.729
AEI49161.1
Estradiol 17-beta-dehydrogenase.
       0.709
AEI47780.1
Ferritin Dps family protein.
  
  
 0.698
Runsl_2762
Glyoxalase/bleomycin resistance protein/dioxygenase.
     
 0.600
AEI49162.1
Transcriptional regulator, HxlR family.
       0.509
AEI49044.1
Protein of unknown function DUF2188.
  
    0.508
AEI51397.1
Multi-sensor hybrid histidine kinase.
  
  
 0.475
AEI49652.1
Multi-sensor hybrid histidine kinase.
  
    0.456
AEI47414.1
Multi-sensor signal transduction histidine kinase.
   
    0.453
AEI46715.1
ThiJ/PfpI domain-containing protein.
  
  
 0.438
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.