STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49161.1Estradiol 17-beta-dehydrogenase. (297 aa)    
Predicted Functional Partners:
AEI49160.1
Peroxiredoxin, Ohr subfamily.
       0.709
AEI49159.1
NADPH:quinone reductase.
     
 0.676
AEI46921.1
3-oxoacyl-(acyl-carrier-protein) reductase.
  
    0.666
AEI51105.1
3-oxoacyl-(acyl-carrier-protein) reductase.
  
    0.614
AEI50264.1
Short-chain dehydrogenase/reductase SDR.
  
    0.595
AEI51277.1
Glucose 1-dehydrogenase.
  
    0.571
AEI51060.1
3-oxoacyl-(acyl-carrier-protein) reductase.
  
    0.556
Runsl_2762
Glyoxalase/bleomycin resistance protein/dioxygenase.
       0.550
AEI49162.1
Transcriptional regulator, HxlR family.
       0.550
AEI47297.1
3-oxoacyl-(acyl-carrier-protein) reductase.
  
    0.534
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.