STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49165.1Mannosylglycoprotein endo-beta-mannosidase. (891 aa)    
Predicted Functional Partners:
AEI50944.1
Glycoside hydrolase family 31.
 
  
 0.697
AEI49167.1
Dihydrodipicolinate synthetase.
 
   
 0.692
AEI46496.1
Alpha-1,2-mannosidase.
 
   
 0.593
AEI46547.1
Alpha-L-fucosidase.
 
   
 0.549
AEI49018.1
Alpha-L-fucosidase.
 
   
 0.540
AEI49164.1
Glutamine--scyllo-inositol transaminase.
       0.529
AEI49166.1
Hypothetical protein.
       0.513
Runsl_0722
Amidohydrolase.
 
      0.496
AEI49026.1
Hypothetical protein.
  
     0.495
Runsl_0400
Dipeptidylaminopeptidase/acylaminoacyl-peptidase -like protein.
 
     0.488
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.