STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49179.1Hypothetical protein. (357 aa)    
Predicted Functional Partners:
AEI47091.1
Hypothetical protein.
  
     0.628
AEI51064.1
Protein of unknown function DUF6 transmembrane.
  
     0.541
AEI47579.1
Hypothetical protein.
  
     0.504
AEI49496.1
FG-GAP repeat-containing protein.
  
     0.487
AEI51062.1
Glycosyl hydrolase 38 domain protein.
  
     0.478
AEI49178.1
L-asparaginase, type II.
       0.477
AEI49177.1
Peptidase S9B dipeptidylpeptidase IV domain protein.
       0.428
AEI49180.1
Transcriptional regulator, AraC family.
  
    0.419
AEI48844.1
Acetyl xylan esterase.
  
     0.404
AEI51893.1
Protein of unknown function DUF1080.
  
     0.402
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.