STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI49200.1Quinoprotein glucose dehydrogenase. (707 aa)    
Predicted Functional Partners:
Runsl_0537
Quinoprotein glucose dehydrogenase.
  
 
  0.935
AEI50222.1
Gluconolactonase.
  
  
 0.922
AEI51827.1
SMP-30/Gluconolaconase/LRE-like region-containing protein.
  
  
 0.919
AEI49654.1
SMP-30/Gluconolaconase/LRE-like region-containing protein.
  
  
 0.918
AEI46647.1
SMP-30/Gluconolaconase/LRE-like region-containing protein.
     
 0.904
AEI51783.1
Quinoprotein glucose dehydrogenase.
  
  
 
0.904
AEI50381.1
Glucose-6-phosphate isomerase.
     
 0.819
AEI47200.1
Pyruvate kinase.
     
 0.810
AEI48993.1
Fructose-bisphosphate aldolase, class II.
     
 0.809
AEI50870.1
Enolase.
     
 0.809
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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