STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49202.1Aldehyde Dehydrogenase. (471 aa)    
Predicted Functional Partners:
AEI49006.1
Aldehyde Dehydrogenase.
  
  
 
0.919
AEI48584.1
Long-chain-fatty-acid--CoA ligase.
  
 0.914
AEI47814.1
Alkane 1-monooxygenase.
  
  
 0.912
AEI49076.1
acetate/CoA ligase.
  
 0.911
AEI51785.1
Nitrilase.
   
 0.910
AEI51296.1
Lactate 2-monooxygenase.
   
 
 0.906
AEI51181.1
Glycerate kinase.
   
 
 0.905
AEI47354.1
Aspartate 1-decarboxylase.
     
 0.904
AEI47353.1
Pantothenate synthetase.
     
 0.901
AEI47631.1
Glucarate dehydratase.
     
 0.900
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.