STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI49203.1Helix-turn-helix domain protein. (336 aa)    
Predicted Functional Partners:
AEI49204.1
Estradiol 17-beta-dehydrogenase.
       0.551
AEI50479.1
Hypothetical protein.
  
     0.542
AEI48127.1
Hypothetical protein.
  
     0.536
AEI48634.1
Hypothetical protein.
  
     0.525
AEI49776.1
Hypothetical protein.
  
     0.500
AEI49202.1
Aldehyde Dehydrogenase.
  
  
 0.498
AEI47581.1
Secreted protein.
  
     0.497
AEI47335.1
Putative membrane protein.
  
     0.496
AEI50891.1
Hypothetical protein.
  
     0.483
AEI48636.1
CBS domain containing protein.
  
     0.455
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.