STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI49206.1Efflux transporter, RND family, MFP subunit. (388 aa)    
Predicted Functional Partners:
AEI47138.1
Acriflavin resistance protein.
 
 0.957
AEI51916.1
Acriflavin resistance protein.
 
 0.956
AEI49207.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
 0.935
AEI49208.1
RND efflux system, outer membrane lipoprotein, NodT family.
 
 0.919
AEI48217.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
 0.861
AEI48218.1
RND efflux system, outer membrane lipoprotein, NodT family.
 
 0.858
AEI49934.1
Heavy metal efflux pump, CzcA family.
 
 0.852
AEI47334.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
 0.850
AEI49450.1
Outer membrane efflux protein.
  
  0.807
AEI48425.1
Outer membrane efflux protein.
  
  0.802
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.