STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI49233.1Mannonate dehydratase. (397 aa)    
Predicted Functional Partners:
AEI47629.1
Mannonate dehydratase.
  
  
  0.972
AEI48695.1
Uronate isomerase.
 
  
 0.946
AEI51080.1
2-deoxy-D-gluconate 3-dehydrogenase.
 
 
 0.919
AEI48658.1
2-deoxy-D-gluconate 3-dehydrogenase.
 
 
 0.915
AEI48965.1
3-oxoacyl-(acyl-carrier-protein) reductase.
 
 
 0.913
AEI48962.1
Mannonate dehydratase.
  
  
 
0.902
AEI51334.1
Galactonate dehydratase.
    
  0.900
AEI50344.1
PfkB domain protein.
 
  
 0.870
AEI48696.1
PfkB domain protein.
 
  
 0.856
AEI51172.1
Sugar-phosphate isomerase, RpiB/LacA/LacB family.
   
 
  0.820
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.