STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49241.1Hypothetical protein. (83 aa)    
Predicted Functional Partners:
AEI51270.1
Hypothetical protein.
  
     0.739
AEI47017.1
Hypothetical protein.
  
     0.732
AEI49810.1
Hypothetical protein.
  
     0.718
AEI47514.1
Hypothetical protein.
  
     0.710
AEI47511.1
Hypothetical protein.
  
     0.700
AEI49564.1
Hypothetical protein.
  
     0.682
AEI48776.1
WD40 repeat-containing protein.
  
     0.664
AEI51471.1
Peptidoglycan-binding lysin domain protein.
  
     0.644
AEI47886.1
Hypothetical protein.
  
     0.638
AEI46836.1
Hypothetical protein.
  
     0.624
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.