STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49251.1Putative signal transduction histidine kinase. (216 aa)    
Predicted Functional Partners:
AEI49250.1
Two component transcriptional regulator, LuxR family.
 
 
 0.810
AEI49252.1
Putative signal transduction histidine kinase.
 
    
0.570
AEI49253.1
Hypothetical protein.
       0.511
AEI47213.1
Glycosyl transferase family 2.
  
     0.492
AEI50460.1
Two component transcriptional regulator, LuxR family.
 
 
 0.445
AEI49254.1
Hypothetical protein.
       0.441
AEI48744.1
Hypothetical protein.
  
     0.427
AEI51493.1
Two component transcriptional regulator, LuxR family.
 
 
 0.417
AEI48786.1
Two component transcriptional regulator, LuxR family.
 
 
 0.403
AEI50869.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.