STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49252.1Putative signal transduction histidine kinase. (268 aa)    
Predicted Functional Partners:
AEI49250.1
Two component transcriptional regulator, LuxR family.
 
 0.897
AEI48839.1
Two component transcriptional regulator, LuxR family.
 
 0.839
Runsl_0960
Two component transcriptional regulator, LuxR family.
 
 0.837
AEI50460.1
Two component transcriptional regulator, LuxR family.
 
 0.836
AEI51493.1
Two component transcriptional regulator, LuxR family.
 
 
 0.830
AEI48786.1
Two component transcriptional regulator, LuxR family.
 
 
 0.825
AEI49639.1
Transcriptional regulator, LuxR family.
 
 
 0.824
AEI49253.1
Hypothetical protein.
       0.809
AEI51278.1
ATP-dependent transcriptional regulator, MalT-like, LuxR family.
 
   
 0.734
AEI49254.1
Hypothetical protein.
       0.655
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.