STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49337.1Ferrodoxin. (101 aa)    
Predicted Functional Partners:
AEI51800.1
NADH-quinone oxidoreductase, E subunit.
 
 
 0.936
AEI48983.1
Nitrate reductase., Nitrite reductase (NAD(P)H).
  
 
 0.933
AEI51224.1
Glutamate synthase (NADPH).
  
 
 0.882
AEI50716.1
Glutamate synthase, NADH/NADPH, small subunit.
   
 
 0.833
AEI51802.1
NADH dehydrogenase (quinone).
 
 
 
 0.830
AEI48730.1
Proton-translocating NADH-quinone oxidoreductase, chain M.
  
    0.787
AEI51473.1
Proton-translocating NADH-quinone oxidoreductase, chain M.
  
    0.787
AEI49336.1
Carboxyl-terminal protease.
       0.527
AEI51223.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
  
  
 0.477
AEI49338.1
Xanthine/uracil/vitamin C permease.
       0.476
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.