STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49366.1protein-(glutamine-N5) methyltransferase, release factor-specific. (284 aa)    
Predicted Functional Partners:
AEI48172.1
Peptide chain release factor 1.
 
 0.992
AEI47452.1
Conserved hypothetical protein CHP00730.
      0.804
AEI50101.1
Sua5/YciO/YrdC/YwlC family protein.
 
  
 0.706
AEI48106.1
Ribosomal protein L15.
  
    0.658
AEI51212.1
tRNA modification GTPase mnmE.
 
   
 0.589
AEI46599.1
ATP synthase subunit delta.
 
   0.583
AEI46687.1
Peptidyl-tRNA hydrolase.
 
  
 0.569
AEI49363.1
Electron transporter SCO1/SenC.
       0.553
AEI49394.1
Translation initiation factor IF-2.
 
  
 0.544
AEI49364.1
Protein of unknown function DUF420.
       0.543
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.