STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI49388.12-oxoglutarate dehydrogenase, E1 subunit. (924 aa)    
Predicted Functional Partners:
AEI49389.1
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase.
 0.999
AEI51658.1
Dihydrolipoyllysine-residue succinyltransferase.
 0.999
AEI49390.1
Dihydrolipoamide dehydrogenase.
 
 0.997
AEI47575.1
Dihydrolipoamide dehydrogenase.
 
 0.995
AEI46685.1
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase.
 0.991
AEI50492.1
Succinyl-CoA ligase (ADP-forming) subunit beta.
 0.989
AEI49876.1
succinyl-CoA synthetase, alpha subunit.
 0.986
AEI46875.1
Catalytic domain-containing protein of components of various dehydrogenase complexes.
 
 0.984
AEI49754.1
Isocitrate dehydrogenase.
 
 0.980
AEI47513.1
Isocitrate dehydrogenase, NADP-dependent.
   
 
 0.978
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.