STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49397.1Phosphatidate cytidylyltransferase. (277 aa)    
Predicted Functional Partners:
AEI48774.1
Undecaprenyl pyrophosphate synthase.
  
 0.984
AEI50146.1
CDP-diacylglycerol/serine O-phosphatidyltransferase.
    
 0.929
AEI48447.1
Phospholipid/glycerol acyltransferase.
    
 0.911
AEI48897.1
Phospholipid/glycerol acyltransferase.
    
 0.911
AEI49396.1
Hypothetical protein.
       0.819
AEI49395.1
Abortive infection protein.
       0.818
AEI50656.1
Glutamate dehydrogenase (NAD(P)(+)).
      0.762
AEI49394.1
Translation initiation factor IF-2.
 
    0.760
AEI51717.1
1-deoxy-D-xylulose 5-phosphate reductoisomerase.
  
  
 0.757
AEI51718.1
Membrane-associated zinc metalloprotease.
  
  
 0.731
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.