STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49413.1Osmosensitive K+ channel signal transduction histidine kinase, sensor subunit KdpD. (375 aa)    
Predicted Functional Partners:
AEI49412.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.985
AEI49415.1
Potassium-transporting ATPase C chain.
 
  
 0.953
AEI49416.1
Potassium-transporting ATPase B chain.
 
  
 0.928
AEI47955.1
Integral membrane sensor signal transduction histidine kinase.
  
 
 0.906
AEI50178.1
Integral membrane sensor signal transduction histidine kinase.
 
      0.900
AEI51552.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
   0.899
AEI48846.1
Integral membrane sensor signal transduction histidine kinase.
 
  
   0.877
AEI49419.1
Potassium-transporting ATPase A chain.
 
  
 0.867
AEI48537.1
Integral membrane sensor signal transduction histidine kinase.
 
      0.838
AEI49414.1
Hypothetical protein.
 
     0.818
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.