STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49414.1Hypothetical protein. (358 aa)    
Predicted Functional Partners:
AEI49413.1
Osmosensitive K+ channel signal transduction histidine kinase, sensor subunit KdpD.
 
     0.818
AEI49412.1
Multi-sensor signal transduction histidine kinase.
 
     0.813
AEI49415.1
Potassium-transporting ATPase C chain.
 
     0.690
AEI49416.1
Potassium-transporting ATPase B chain.
 
     0.625
AEI49411.1
Hypothetical protein.
       0.428
AEI49914.1
Outer membrane efflux protein.
  
     0.419
AEI49915.1
Efflux transporter, RND family, MFP subunit.
  
     0.410
AEI50238.1
Hypothetical protein.
  
     0.409
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.