STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49449.1Efflux transporter, RND family, MFP subunit. (466 aa)    
Predicted Functional Partners:
AEI49450.1
Outer membrane efflux protein.
 
  0.953
AEI47068.1
Protein of unknown function DUF214.
 
    0.832
AEI47490.1
Protein of unknown function DUF214.
 
    0.832
AEI48425.1
Outer membrane efflux protein.
 
  0.824
AEI47570.1
Outer membrane efflux protein.
 
  0.781
AEI49633.1
Outer membrane protein.
 
  0.769
AEI49628.1
Phosphonate-transporting ATPase.
 
  
 0.763
AEI47406.1
Outer membrane efflux protein.
 
  0.732
AEI47137.1
Outer membrane efflux protein.
  
  0.687
AEI47332.1
Outer membrane efflux protein.
  
  0.687
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.