STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49450.1Outer membrane efflux protein. (484 aa)    
Predicted Functional Partners:
AEI49449.1
Efflux transporter, RND family, MFP subunit.
 
  0.953
AEI49206.1
Efflux transporter, RND family, MFP subunit.
  
  0.764
AEI47333.1
Efflux transporter, RND family, MFP subunit.
  
  0.756
AEI47406.1
Outer membrane efflux protein.
  
  
  0.747
AEI48216.1
Efflux transporter, RND family, MFP subunit.
  
  0.746
AEI48217.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
  0.743
AEI47334.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
  0.741
AEI49207.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
  0.740
AEI47407.1
Efflux transporter, RND family, MFP subunit.
  
  0.733
AEI47139.1
Efflux transporter, RND family, MFP subunit.
   
  0.707
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.