STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49479.1DNA polymerase III, alpha subunit. (1234 aa)    
Predicted Functional Partners:
AEI47860.1
DNA polymerase III, beta subunit.
  
 
 0.991
AEI51854.1
DNA polymerase III, delta subunit.
  
 0.990
AEI51692.1
DNA polymerase III, subunits gamma and tau.
 
 0.988
Runsl_3621
DNA polymerase III gamma/tau subunits-like protein.
 
 0.985
AEI46753.1
Exonuclease RNase T and DNA polymerase III.
  
 0.984
AEI47066.1
Exonuclease RNase T and DNA polymerase III.
   
 0.978
AEI50023.1
DNA polymerase III, epsilon subunit.
    
 0.927
Runsl_4484
Single-strand DNA-binding protein.
   
 
 0.803
AEI50932.1
Single-strand binding protein.
   
 
 0.803
AEI51356.1
Single-strand binding protein.
   
 
 0.803
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.