STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI49523.1Protein of unknown function DUF820. (192 aa)    
Predicted Functional Partners:
AEI48600.1
Protein of unknown function DUF820.
  
     0.632
AEI48924.1
Protein of unknown function DUF820.
  
     0.597
AEI48614.1
Protein of unknown function DUF820.
  
     0.589
AEI49524.1
Dihydroxy-acid dehydratase.
       0.538
AEI46917.1
Protein of unknown function DUF820.
  
     0.534
AEI50015.1
Protein of unknown function DUF820.
  
     0.509
AEI50688.1
Hypothetical protein.
  
     0.478
AEI50004.1
Protein of unknown function DUF820.
  
     0.428
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.