STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49608.1Endothelin-converting enzyme 1. (677 aa)    
Predicted Functional Partners:
AEI49609.1
Hypothetical protein.
 
    0.794
AEI51119.1
tRNA pseudouridine synthase A.
 
      0.575
AEI48486.1
DNA polymerase I.
  
  
 0.533
AEI49607.1
Hypothetical protein.
       0.482
AEI49606.1
Hypothetical protein.
       0.473
AEI47292.1
Holliday junction ATP-dependent DNA helicase ruvB.
   
    0.462
AEI47768.1
Holliday junction ATP-dependent DNA helicase ruvB.
   
    0.462
AEI49605.1
Hypothetical protein.
       0.456
AEI49302.1
Peptidase M28.
  
   
 0.441
AEI48231.1
Proteinase inhibitor I4 serpin.
    
 0.411
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.