STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI49609.1Hypothetical protein. (349 aa)    
Predicted Functional Partners:
AEI49608.1
Endothelin-converting enzyme 1.
 
    0.783
AEI49610.1
Putative secreted protein.
 
  
  0.635
AEI49611.1
Glycosyl transferase family 2.
 
     0.614
AEI49603.1
Hypothetical protein.
 
     0.584
AEI47003.1
Phosphoesterase.
  
 
   0.552
AEI47975.1
Hypothetical protein.
  
     0.551
AEI48759.1
Xylose isomerase domain-containing protein TIM barrel.
  
     0.509
AEI50363.1
Phosphoesterase.
  
 
   0.474
AEI46816.1
Peptidase M14 carboxypeptidase A.
  
     0.473
AEI48321.1
Hypothetical protein.
  
     0.465
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.