STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI49631.1Tetratricopeptide domain protein. (867 aa)    
Predicted Functional Partners:
AEI50711.1
Tetratricopeptide TPR_1 repeat-containing protein.
 
  0.810
AEI47031.1
Hypothetical protein.
  
     0.774
AEI47514.1
Hypothetical protein.
  
     0.774
AEI48014.1
Hypothetical protein.
  
     0.774
AEI47886.1
Hypothetical protein.
  
     0.768
AEI50863.1
Hypothetical protein.
  
     0.768
AEI49877.1
Hypothetical protein.
  
     0.767
AEI47339.1
Hypothetical protein.
  
     0.765
AEI51254.1
Hypothetical protein.
 
     0.764
AEI48224.1
Hypothetical protein.
  
     0.763
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.