STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49650.1O-sialoglycoprotein endopeptidase. (333 aa)    
Predicted Functional Partners:
AEI50117.1
Universal protein YeaZ.
  
 
 0.929
AEI51272.1
Uncharacterized protein family UPF0079, ATPase.
 
 
 0.916
AEI48709.1
Phenylalanyl-tRNA synthetase alpha chain.
 
   
 0.725
AEI51398.1
Ribosomal RNA small subunit methyltransferase A.
 
  
 0.725
AEI51766.1
Sua5/YciO/YrdC/YwlC family protein.
 
 0.716
AEI50184.1
Phosphonate-transporting ATPase.
 
    0.686
AEI47487.1
seryl-tRNA synthetase.
 
  
 0.668
AEI50101.1
Sua5/YciO/YrdC/YwlC family protein.
  
 0.643
AEI47122.1
Translation elongation factor G.
 
 
 0.640
AEI49649.1
Protein of unknown function DUF490.
       0.638
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.