Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Runsl_3317L-lactate dehydrogenase (cytochrome). (381 aa)    
Predicted Functional Partners:
AEI50772.1
D-lactate dehydrogenase (cytochrome).
 0.947
AEI51123.1
Malic protein NAD-binding protein.
    
 0.930
AEI51296.1
Lactate 2-monooxygenase.
  
  
 
0.923
AEI47200.1
Pyruvate kinase.
   
 
 0.921
AEI46464.1
D-lactate dehydrogenase.
  
 
 0.919
AEI51223.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
    
 0.918
AEI46892.1
PEP-utilizing protein mobile region.
     
 0.907
AEI46893.1
Pyruvate, water dikinase.
     
 0.907
AEI51220.1
2-oxoglutarate synthase.
    
 0.904
AEI47157.1
Pyruvate dehydrogenase (acetyl-transferring).
     
  0.900
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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