STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49696.1Glucose-inhibited division protein A. (451 aa)    
Predicted Functional Partners:
AEI51043.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
 0.968
AEI51801.1
NADH-quinone oxidoreductase, F subunit.
  
 
 0.820
AEI47824.1
Glycine dehydrogenase (decarboxylating).
  
  
 0.797
AEI51802.1
NADH dehydrogenase (quinone).
  
 
 0.795
AEI50492.1
Succinyl-CoA ligase (ADP-forming) subunit beta.
  
 
 0.759
AEI51041.1
Succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family.
  
 
 0.759
AEI48946.1
FAD dependent oxidoreductase.
  
 
 0.757
AEI49388.1
2-oxoglutarate dehydrogenase, E1 subunit.
  
 
 0.741
AEI49876.1
succinyl-CoA synthetase, alpha subunit.
  
 
 0.731
AEI47319.1
Hypothetical protein.
  
     0.704
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.