STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49736.1MazG nucleotide pyrophosphohydrolase. (117 aa)    
Predicted Functional Partners:
AEI51713.1
Protein of unknown function DUF1599.
  
     0.663
AEI49058.1
3-phosphoshikimate 1-carboxyvinyltransferase.
      0.662
AEI51306.1
Hypothetical protein.
  
     0.650
AEI49444.1
Protein of unknown function DUF1573.
  
     0.559
AEI49878.1
Uroporphyrinogen III synthase HEM4.
  
     0.540
AEI47899.1
Hypothetical protein.
  
     0.498
AEI49735.1
Uracil phosphoribosyltransferase.
       0.481
AEI49733.1
Hypothetical protein.
       0.449
AEI49734.1
Nucleotide-binding protein, PIN domain-containing protein.
       0.449
AEI50177.1
Protein of unknown function DUF1573.
  
     0.430
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.