Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEI49756.1Polyphosphate:nucleotide phosphotransferase, PPK2 family. (300 aa)    
Predicted Functional Partners:
AEI51546.1
Cytochrome c oxidase, cbb3-type, subunit I.
  
    0.882
AEI51259.1
Polyphosphate kinase.
 
   
 0.817
AEI48655.1
Heme NO binding domain protein.
   
    0.614
AEI47173.1
Hypothetical protein.
   
    0.537
AEI51050.1
Hypothetical protein.
   
    0.537
AEI50154.1
Ppx/GppA phosphatase.
 
  
 0.506
AEI51551.1
Oxygen-independent coproporphyrinogen III oxidase.
 
    0.505
AEI49757.1
Multi-sensor hybrid histidine kinase.
     
 0.498
AEI49525.1
Ppx/GppA phosphatase.
 
  
 0.467
AEI47710.1
Radical SAM domain protein.
   
    0.460
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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