STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49764.1Glycosyl transferase family 2. (314 aa)    
Predicted Functional Partners:
AEI49765.1
Glycosyl transferase family 2.
 
   
 0.940
AEI49766.1
O-antigen polymerase.
 
  
 0.919
AEI49763.1
Sugar transferase.
 
  
 0.912
AEI49769.1
Glycosyl transferase group 1.
    0.796
AEI49780.1
Glycosyl transferase family 2.
 
  
 0.761
AEI48998.1
UDP-galactopyranose mutase.
    0.725
AEI49772.1
Lipopolysaccharide biosynthesis protein.
 
  
 0.702
AEI49775.1
Glycosyl transferase family 2.
 
     0.626
AEI49762.1
Response regulator receiver protein.
       0.585
AEI49767.1
Glycosyl transferase family 14.
 
     0.552
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.