STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI49775.1Glycosyl transferase family 2. (301 aa)    
Predicted Functional Partners:
AEI49774.1
Acyltransferase 3.
     0.668
AEI49778.1
Glycosyl transferase family 2.
 
     0.652
AEI49764.1
Glycosyl transferase family 2.
 
    0.633
AEI49773.1
Polysaccharide biosynthesis protein.
  
    0.632
AEI49772.1
Lipopolysaccharide biosynthesis protein.
 
    0.605
AEI49769.1
Glycosyl transferase group 1.
 
    0.570
AEI49765.1
Glycosyl transferase family 2.
 
   0.546
AEI49776.1
Hypothetical protein.
       0.531
AEI49763.1
Sugar transferase.
 
  
 0.527
AEI49771.1
Outer membrane efflux protein.
       0.527
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.