STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI49859.1Translation initiation factor SUI1. (111 aa)    
Predicted Functional Partners:
AEI48103.1
Translation initiation factor IF-1.
   
 0.980
AEI48119.1
Ribosomal protein S3.
  
 
 0.945
AEI48116.1
30S ribosomal protein S17.
  
 
 0.926
AEI47123.1
30S ribosomal protein S10.
   
 
 0.921
AEI50969.1
Ribosomal protein S15.
   
 
 0.913
AEI48836.1
Ribosomal protein S12.
   
 
 0.909
AEI48111.1
Ribosomal protein S8.
 
 
 0.908
AEI48835.1
Ribosomal protein S7.
   
 
 0.902
AEI48112.1
30S ribosomal protein S14.
  
   0.901
AEI48121.1
Ribosomal protein S19.
  
   0.901
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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