STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49859.1Translation initiation factor SUI1. (111 aa)    
Predicted Functional Partners:
AEI48119.1
Ribosomal protein S3.
  
 
 0.948
AEI48116.1
30S ribosomal protein S17.
  
   0.936
AEI48103.1
Translation initiation factor IF-1.
   
 
 0.889
AEI48121.1
Ribosomal protein S19.
  
   0.888
AEI48836.1
Ribosomal protein S12.
   
 
 0.878
AEI47123.1
30S ribosomal protein S10.
   
 
 0.875
AEI50969.1
Ribosomal protein S15.
   
 
 0.875
AEI48111.1
Ribosomal protein S8.
 
   0.872
AEI48101.1
30S ribosomal protein S13.
  
 
 0.871
AEI48112.1
30S ribosomal protein S14.
  
   0.868
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.