AEI49934.1 protein (Runella slithyformis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AEI49934.1

Heavy metal efflux pump, CzcA family. (1436 aa)

Predicted Functional Partners:

AEI49933.1

0.974

AEI49783.1

0.918

AEI49915.1

0.913

AEI48062.1

0.878

AEI49344.1

0.796

AEI47139.1

0.793

AEI47407.1

0.792

AEI50427.1

0.779

AEI51917.1

0.778

AEI49638.1

0.777

Your Current Organism:

Runella slithyformis

NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEI47139.1	AEI47407.1	Runsl_0697	Runsl_0976	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.664
AEI47139.1	AEI49344.1	Runsl_0697	Runsl_2956	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.657
AEI47139.1	AEI49638.1	Runsl_0697	Runsl_3263	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.858
AEI47139.1	AEI49783.1	Runsl_0697	Runsl_3417	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.474
AEI47139.1	AEI49934.1	Runsl_0697	Runsl_3573	Efflux transporter, RND family, MFP subunit.	Heavy metal efflux pump, CzcA family.	0.793
AEI47139.1	AEI50427.1	Runsl_0697	Runsl_4080	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.658
AEI47139.1	AEI51917.1	Runsl_0697	Runsl_5627	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.603
AEI47407.1	AEI47139.1	Runsl_0976	Runsl_0697	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.664
AEI47407.1	AEI48062.1	Runsl_0976	Runsl_1637	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.413
AEI47407.1	AEI49344.1	Runsl_0976	Runsl_2956	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.649
AEI47407.1	AEI49638.1	Runsl_0976	Runsl_3263	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.760
AEI47407.1	AEI49783.1	Runsl_0976	Runsl_3417	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.429
AEI47407.1	AEI49934.1	Runsl_0976	Runsl_3573	Efflux transporter, RND family, MFP subunit.	Heavy metal efflux pump, CzcA family.	0.792
AEI47407.1	AEI50427.1	Runsl_0976	Runsl_4080	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.635
AEI47407.1	AEI51917.1	Runsl_0976	Runsl_5627	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.654
AEI48062.1	AEI47407.1	Runsl_1637	Runsl_0976	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.413
AEI48062.1	AEI49915.1	Runsl_1637	Runsl_3554	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.524
AEI48062.1	AEI49934.1	Runsl_1637	Runsl_3573	Efflux transporter, RND family, MFP subunit.	Heavy metal efflux pump, CzcA family.	0.878
AEI49344.1	AEI47139.1	Runsl_2956	Runsl_0697	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.657
AEI49344.1	AEI47407.1	Runsl_2956	Runsl_0976	Efflux transporter, RND family, MFP subunit.	Efflux transporter, RND family, MFP subunit.	0.649

page 1 of 4

Server load: low (20%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About