STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI49944.1Peptidyl-prolyl cis-trans isomerase cyclophilin type. (147 aa)    
Predicted Functional Partners:
AEI48789.1
Peptidylprolyl isomerase.
 
 0.935
AEI49335.1
FKBP-type peptidyl-prolyl isomerase domain protein.
 
 0.935
AEI48776.1
WD40 repeat-containing protein.
  
  0.752
AEI49455.1
Chaperone protein dnaJ.
 
 
 0.740
AEI47122.1
Translation elongation factor G.
   
 0.714
AEI51886.1
Heat shock protein Hsp90.
  
 0.696
AEI49943.1
Hypothetical protein.
       0.689
AEI49939.1
Histone deacetylase superfamily.
   
 0.678
AEI48787.1
Nucleoside diphosphate kinase.
  
 0.674
AEI50086.1
Hypothetical protein.
   
 0.654
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.