STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50136.1Phosphopantetheine adenylyltransferase. (157 aa)    
Predicted Functional Partners:
AEI50586.1
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase.
 
 
 0.945
AEI49560.1
Dephospho-CoA kinase.
 
  
 0.943
AEI50541.1
Putative transcriptional acitvator, Baf family.
 
  
 0.929
AEI48519.1
Putative transcriptional acitvator, Baf family.
 
  
 0.928
AEI51694.1
Acyl carrier protein phosphodiesterase.
     
 0.903
AEI51124.1
Riboflavin biosynthesis protein RibF.
 
   
 0.794
AEI50135.1
Hypothetical protein.
       0.750
AEI47030.1
GMP synthase (glutamine-hydrolyzing).
 
   
 0.733
AEI47497.1
Uridylate kinase.
 
   
 0.689
AEI47463.1
Guanylate kinase.
 
  
 0.630
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.