STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI50177.1Protein of unknown function DUF1573. (126 aa)    
Predicted Functional Partners:
AEI49399.1
Metallophosphoesterase.
  
     0.693
AEI47113.1
Hypothetical protein.
  
     0.657
AEI50178.1
Integral membrane sensor signal transduction histidine kinase.
 
     0.628
AEI48185.1
Hypothetical protein.
  
     0.622
AEI50498.1
Hypothetical protein.
  
     0.588
AEI51710.1
DoxX family protein.
  
     0.570
AEI48707.1
Ribosomal subunit interface protein.
  
     0.564
AEI49277.1
TonB family protein.
  
     0.544
AEI51169.1
Hypothetical protein.
  
     0.536
AEI51897.1
Hypothetical protein.
  
     0.512
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.