STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50178.1Integral membrane sensor signal transduction histidine kinase. (415 aa)    
Predicted Functional Partners:
AEI47842.1
Two component transcriptional regulator, winged helix family.
 
  0.975
AEI51730.1
Two component transcriptional regulator, AraC family.
 
 0.949
AEI49506.1
Two component transcriptional regulator, AraC family.
 
 0.938
AEI50179.1
Two component transcriptional regulator, winged helix family.
 
   0.908
AEI49413.1
Osmosensitive K+ channel signal transduction histidine kinase, sensor subunit KdpD.
 
      0.900
AEI48627.1
Two component transcriptional regulator, winged helix family.
 
   0.805
AEI48538.1
Two component transcriptional regulator, winged helix family.
 
   0.804
AEI49762.1
Response regulator receiver protein.
 
   0.785
AEI49505.1
Response regulator receiver sensor signal transduction histidine kinase.
 
 
 0.753
Runsl_5328
Response regulator receiver protein.
  
 
   0.752
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.