STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50194.1Erythromycin esterase. (436 aa)    
Predicted Functional Partners:
AEI49170.1
Erythromycin esterase.
  
     0.705
AEI50193.1
Putative transcriptional regulator, Crp/Fnr family.
       0.608
AEI47106.1
1-phosphofructokinase.
  
  
 0.598
AEI47518.1
Alpha/beta hydrolase fold protein.
   
    0.467
AEI50195.1
Cupin 2 conserved barrel domain protein.
       0.461
AEI50196.1
Hypothetical protein.
       0.404
AEI50197.1
Hypothetical protein.
       0.404
AEI50198.1
Helicase A859L.
       0.404
AEI50199.1
Site-specific DNA-methyltransferase (adenine-specific).
       0.404
AEI50200.1
Type III restriction system methylase.
       0.404
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.