STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50208.1Sulfate-transporting ATPase. (244 aa)    
Predicted Functional Partners:
AEI48555.1
Permease YjgP/YjgQ family protein.
 
 
 0.990
AEI50970.1
Permease YjgP/YjgQ family protein.
 
 
 0.979
AEI51486.1
ABC transporter related protein.
  
  
 
0.922
AEI47278.1
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase.
 
  
 0.806
AEI47276.1
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase.
 
  
 0.805
AEI47854.1
MotA/TolQ/ExbB proton channel.
 
   
 0.776
AEI49832.1
lipid-A-disaccharide synthase.
 
   
 0.753
AEI51742.1
Protein of unknown function DUF140.
 
  
  0.742
AEI51813.1
UDP-N-acetylglucosamine1- carboxyvinyltransferase.
      0.741
AEI47277.1
(3R)-hydroxymyristoyl-(acyl-carrier- protein)dehydratase.
 
  
 0.725
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.