STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50214.1Aldehyde dehydrogenase (NADP(+)). (492 aa)    
Predicted Functional Partners:
AEI47229.1
Dihydrodipicolinate synthase.
 
 
 0.961
AEI49388.1
2-oxoglutarate dehydrogenase, E1 subunit.
   
 0.873
AEI51223.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
   
 0.856
AEI49754.1
Isocitrate dehydrogenase.
   
 0.851
AEI47513.1
Isocitrate dehydrogenase, NADP-dependent.
   
 0.850
AEI51220.1
2-oxoglutarate synthase.
     
 0.815
AEI48979.1
4-hydroxyproline epimerase.
 
 
 
 0.714
AEI50163.1
D-amino-acid dehydrogenase.
 
  
 0.665
AEI50213.1
Nuclease A inhibitor family protein.
   
 
 0.630
AEI50165.1
Proline racemase.
 
 
 
 0.571
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.