STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50231.1Fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (371 aa)    
Predicted Functional Partners:
AEI50939.1
Naringenin-chalcone synthase.
 
  
 0.811
AEI50230.1
ABC transporter related protein.
       0.773
AEI50336.1
UbiA prenyltransferase.
 
  
 0.761
AEI50229.1
Hypothetical protein.
       0.658
AEI50734.1
Electron transfer flavoprotein alpha/beta-subunit.
  
 
 0.522
AEI50232.1
Glucose/sorbosone dehydrogenase-like protein.
       0.516
AEI50228.1
Sulphatase-modifying factor protein.
       0.496
AEI50233.1
Methylmalonyl-CoA mutase.
     
 0.454
AEI50370.1
phospholipase/Carboxylesterase.
  
     0.452
AEI50143.1
DinB family protein.
  
     0.446
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.