Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEI50280.1Peptidase M23. (226 aa)    
Predicted Functional Partners:
AEI48800.1
Acetylornithine transaminase.
 
  
   0.898
AEI51786.1
Acetylornithine transaminase.
 
      0.894
AEI49466.1
Acetylornithine transaminase.
 
  
   0.867
AEI47102.1
Ornithine aminotransferase.
 
  
   0.819
AEI50279.1
Thiol-disulfide oxidoreductase DCC.
       0.491
AEI50281.1
Hypothetical protein.
       0.482
Runsl_3923
tRNA-Gln.
  
    0.423
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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